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Publications from 2023

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    A data-driven approach to solving a 1D inverse scattering problem Article

    AIP Advances, 065310.1-065310.9.

    T. van Leeuwen (Tristan) and A. Tataris (Andreas)

    June 2023
    open access
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    Modelling novelty detection in the thalamocortical loop Article

    PLoS Computational Biology, 19(5), e1009616.1-e1009616.35.

    C. Han (Chao), G. English (Gwendolyn), H.P. Saal (Hannes), G. Indiveri (Giacomo), A. Gilra (Aditya), W. Von der Behrens (Wolfger) and E. Vasilaki (Eleni)

    May 2023
    open access
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    A note on Marchenko-linearised full waveform inversion for imaging Article

    Geophysical Journal International, 234(1), 228-242.

    L. Diekmann (Leon), I. Vasconcelos (Ivan) and T. van Leeuwen (Tristan)

    July 2023
    open access
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    Forecasting call and chat volumes at online helplines for mental health Article

    BMC Public Health, 23(1)

    T.R. de Boer (Tim Rens), S. Mérelle (Saskia), S. Bhulai (Sandjai), R. Gilissen (Renske) and R.D. van der Mei (Rob)

    May 2023
    open access
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    Bayesian network analysis of antidepressant treatment trajectories Article

    Nature Scientific Reports, 13(1)

    R.J. Turner (Rosanne), K. Hagoort (Karin), R.J. Meijer (Rosa), F. Coenen (Femke) and F.E. Scheepers (Floortje)

    May 2023
    open access
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    Spectral imaging and tomographic reconstruction methods for industrial applications Dissertation

    Computational Imaging

    M.T. Zeegers (Mathé)

    May 2023
  • Additive combinatorics Additive combinatorics is a relatively new area of mathematics that brings together areas such as combinatorial and analytic number theory, Ramsey theory, harmonic analysis, graph theory, extremal combinatorics, algebraic methods, ergodic theory and probability theory. Other

    March 2023
  • Mitigating the limited view problem in photoacoustic tomography for a planar detection geometry by regularised iterative reconstruction Article

    IEEE Transactions on Medical Imaging

    J. Zhu (Jiaqi), N. Huynh (Nam), O. Ogunlade (Olumide), R. Ansari (Rehman), F. Lucka (Felix), B.T. Cox (Ben) and P. Beard (Paul)

    January 2023
  • Convolutions, transformers, and their ensembles for the segmentation of organs at risk in radiation treatment of cervical cancer In Proceedings

    V. Kostoulas (Vangelis), P.A.N. Bosman (Peter) and T. Alderliesten (Tanja)

    April 2023
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    The one hundred year web In Proceedings

    S. Pemberton (Steven)

    April 2023
    open access
  • A Knowledge Graph of contentious terminology for inclusive representation of cultural heritage Software|Data

    A. Nesterov (Andrei) and J.R. van Ossenbruggen (Jacco)

    March 2023
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    Comparison of neural closure models for discretised PDEs Article

    Computers & Mathematics with Applications, 94-107.

    H.A. Melchers (Hugo), D.T. Crommelin (Daan), B. Koren (Barry), V. Menkovski and B. Sanderse (Benjamin)

    August 2023
    open access
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    Integrating ADTs in KeY and their application to history-based reasoning about collection Article

    Formal Methods in System Design

    J. Bian (Jinting), H.A. Hiep (Hans-Dieter), F.S. de Boer (Frank) and C.P.T. de Gouw (Stijn)

    May 2023
    open access
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    A Knowledge Graph of contentious terminology for inclusive representation of cultural heritage In Proceedings

    A. Nesterov (Andrei), L. Hollink (Laura), M. van Erp (Marieke) and J.R. van Ossenbruggen (Jacco)

    May 2023
  • byin-cwi/sFPTT: Training SNN via FPTT Software|Data

    B. Yin (Bojian)

    January 2023
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    The optimal input-independent baseline for binary classification: The Dutch Draw Article

    Statistica Neerlandica

    J. Pries (Joris), E.P. van de Bijl (Etienne), J.G. Klein (Jan), S. Bhulai (Sandjai) and R.D. van der Mei (Rob)

    April 2023
    open access
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    Reflecting on hybrid events: Learning from a year of hybrid experiences In Proceedings

    A.A. Ansah (Alberta), A.S. Vivacqua (Adriana), S. Zhong (Sailin), S.C.J. Boll (Susanne), M. Constantinides (Marios), H. Verma (Himanshu), A. El Ali (Abdallah), A. Lushnikova (Alina), H.S. Alavi (Hamed), S. Rintel (Sean), et al. A.L. Kun (Andrew), O. Shaer (Orit), A.L. Cox (Anna), K. Gerling (Kathrin), M. Muller (Michael), V. Rusnak (Vit), L.S. Machado (Leticia Santos) and T. Kosch (Thomas)

    April 2023
    open access
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    An interpretable method for automated classification of spoken transcripts and written text Article

    Evolutionary Intelligence

    M. Wahde (Mattias), M.L. Della Vedova (Marco), M. Virgolin (Marco) and M. Suvanto (Minerva)

    May 2023
    open access
  • GOMEA Software

    P.A. Bouter (Anton)

    January 2023
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    A Joint Python/C++ Library for Efficient yet Accessible Black-Box and Gray-Box Optimization with GOMEA. Article

    P.A. Bouter (Anton) and P.A.N. Bosman (Peter)

    May 2023
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    Accurate online training of dynamical spiking neural networks through Forward Propagation Through Time Article

    Nature Machine Intelligence

    B. Yin (Bojian), F. Corradi (Federico) and S.M. Bohte (Sander)

    May 2023
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    Compressed Σ-protocol theory Dissertation

    Cryptology

    T. Attema (Thomas)

    June 2023
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    Choreographic programming of isolated transactions In Proceedings

    T. Smeele (Ton) and S.-S.T.Q. Jongmans (Sung)

    April 2023
    open access
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    Using metadata to understand search behavior in digital libraries Dissertation

    CWI management

    T. Bogaard (Tessel)

    May 2023
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    A scaling-invariant algorithm for linear programming whose running time depends only on the constraint matrix Article

    Mathematical Programming

    D.N. Dadush (Daniel), S. Huiberts (Sophie), B. Natura (Bento) and L.A. Végh (László)

    April 2023
    open access
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    Discovery of novel CSF biomarkers to predict progression in dementia using machine learning Article

    Nature Scientific Reports, 13(1), 6531.1-6531.13.

    D. Gogishvili (Dea), E.M. Vromen (Eleonora), S. Koppes-den Hertog (Sascha), A.W. Lemstra (Afina), Y.A.L. Pijnenburg (Yolande), P.J. Visser (Pieter Jelle), B.M. Tijms (Betty), M. Del Campo (Marta), S. Abeln (Sanne), C.E. Teunissen (Charlotte), et al. L. Vermunt (Lisa)

    April 2023
    open access
  • VR2Gather: A collaborative social VR system for adaptive multi-party real-time communication Article

    IEEE MultiMedia, 1-13.

    I. Viola (Irene), A.J. Jansen (Jack), S. Subramanyam (Shishir), I. Reimat (Ignacio) and P.S. César Garcia (Pablo Santiago)

    April 2023
  • Group synchrony for emotion recognition using physiological signals Article

    IEEE Transactions on Affective Computing, 1-12.

    P. Bota (Patricia), T. Zhang (Tianyi), A. El Ali (Abdallah), A. Fred (Ana), H.P.D. Silva (Hugo) and P.S. César Garcia (Pablo Santiago)

    January 2023
  • Adjoint operators enable fast and amortized machine learning based Bayesian uncertainty quantification In Proceedings

    R. Orozco (Rafael), A. Siahkoohi (Ali), G. Rizzuti (Gabrio), T. van Leeuwen (Tristan) and F.J. Herrmann (Felix)

    April 2023
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    Two-block substitutions and morphic words Article

    Advances in Applied Mathematics, 102536.1-102536.8.

    F.M. Dekking (Michel) and M. Keane (Michael)

    July 2023
    open access
  • Emerging business models in local energy markets: A systematic review of peer-to-peer, community self-consumption, and transactive energy models Article

    Renewable and Sustainable Energy Reviews

    J.M. Schwidtal (Jan Marc), P. Piccini (P.), M. Troncia (M.), R. Chitchyan (Ruzanna), M. Montakhabi (Mehdi), C. Francis (Christina), A. Gorbatcheva (Anna), T. Capper (Timothy), M.A. Mustafa (Mustafa), M. Andoni (Merlinda), et al. V. Robu (Valentin), M. Bahloul (Mohamed), I.J. Scott (Ian), T. Mbavarira (Tanaka), J.M. Espana (Juan Manuel) and L. Kiesling (Lynne)

    June 2023
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    Generalizing DP-SGD with shuffling and batch clipping Article

    CoRR abs

    M.E. van Dijk (Marten), P.H. Nguyen (Phuong Ha), T. N. Nguyen (Toan) and L. M. Nguyen (Lam)

    March 2023
  • mzeegers/DeepFODDataGenerator: DeepFODDataGenerator v1.0.1 Software|Data

    M.T. Zeegers (Mathé)

    April 2023
  • Quantitative modeling of streamer discharge branching in air Software|Data

    Z. Wang (Zhen), S. Dijcks (Siebe), Y. Guo (Yihao), M. van der Leegte (Martijn), A.B. Sun (Anbang), U. Ebert (Ute), S. Nijdam (Sander) and H.J. Teunissen (Jannis)

    March 2023
  • mzeegers/MC-DART: MC-DART v1.0.1 Software|Data

    M.T. Zeegers (Mathé)

    April 2023
  • mzeegers/DRCNN: Data Reduction CNN v1.0.1 Software|Data

    M.T. Zeegers (Mathé)

    April 2023
  • mzeegers/ADJUST: ADJUST v1.0.2 Software|Data

    A.A. Kadu (Ajinkya) and M.T. Zeegers (Mathé)

    April 2023
  • TREVERSE: TRial-and-Error lightweight secure reVERSE authentication with simulatable PUFs Article

    IEEE Transactions on Dependable and Secure Computing, 19(1), 419-437.

    Y. Gao (Yansong), M.E. van Dijk (Marten), L. Xu (Lei), W. Yang (Wei), S. Nepal (Surya) and D.C. Ranasinghe (Damith)

    February 2023
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    Considerations on the theory of training models with differential privacy Article

    CoRR abs

    M.E. van Dijk (Marten) and P.H. Nguyen (Phuong Ha)

    March 2023
    open access
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    Exact anytime-valid confidence intervals for contingency tables and beyond Article

    Statistics and Probability Letters

    R.J. Turner (Rosanne) and P.D. Grünwald (Peter)

    July 2023
    open access
  • Modeling and demonstrating the effect of human decisions on the distribution grid In Proceedings

    S.C. Doumen (Sjoerd), J. Hönen (Jens), P. Nguyen (Phuong), J.L. Hurink (Johann), A.P. Zwart (Bert) and K. Kok (Koen)

    March 2023
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    The FastLanes Compression Layout: Decoding >100 billion integers per second with scalar code Tech Report

    A. Afroozeh (Azim) and P.A. Boncz (Peter)

    April 2023
    open access
  • VeyMont: Parallelising verified programs instead of verifying parallel programs In Proceedings

    P. van den Bos (Petra) and S.-S.T.Q. Jongmans (Sung)

    March 2023
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    Het PQC-migratie handboek : Richtlijnen voor het migreren naar post-quantumcryptografie Report

    March 2023
    open access
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    The PQC migration handbook : Guidelines for migrating to post-quantum cryptography Report

    March 2023
    open access
  • Finding the cyclic covers of a string In Proceedings

    R. Grossi (Roberto), C.S. Iliopoulos (Costas), J. Jansson (Jesper), Z. Lim (Zara), W.-K. Sung (Wing-Kin) and W.P. Zuba (Wiktor)

    March 2023
  • The 13th international Automated Negotiating Agent Competition challenges and results In Proceedings

    R. Aydoğan (Reyhan), T. Baarslag (Tim), Fujita (Katsuhide), H.H. Hoos (Holger), C.M. Jonker (Catholijn), Y. Mohammad (Yasser) and B.M. Renting (Bram)

    March 2023
  • Multi-objective learning using HV maximization In Proceedings

    T.M. Deist (Timo), M. Grewal (Monika), F.J.W.M. Dankers (Frank), T. Alderliesten (Tanja) and P.A.N. Bosman (Peter)

    March 2023
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    Simple and rigorous proof method for the security of practical Quantum Key Distribution in the Single-Qubit regime using mismatched basis measurements Article

    Quantum Reports, 5(1), 52-77.

    M. Boyer (Michel), Brassard, G. (Gilles), N. Godbout (Nicolas), R. Liss (Rotem) and S. Virally (Stéphane)

    January 2023
    open access
  • The e-posterior Article

    Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, 381(2247)

    P.D. Grünwald (Peter)

    May 2023
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    Eelco Visser as a typographic designer In Proceedings

    P. Klint (Paul)

    March 2023
    open access
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    Comparing bottom-up with top-down parsing architectures for the syntax definition formalism from a disambiguation standpoint In Proceedings

    J.J. Vinju (Jurgen)

    March 2023
    open access
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    Eelco Visser and IFIP WG 2.16 In Proceedings

    T. van der Storm (Tijs)

    March 2023
    open access
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    Semantics engineering with concrete syntax In Proceedings

    T. van der Storm (Tijs)

    March 2023
    open access
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    Computation of the confluent hypergeometric function U(a,b,x) and its derivative for positive arguments Article

    Numerical Algorithms

    A. Gil (Amparo), D. Ruiz-Antolin (Diego), J. Segura (Javier) and N.M. Temme (Nico)

    March 2023
    open access
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    Nanopublication-based semantic publishing and reviewing: A field study with formalization papers Article

    PeerJ Computer Science, e1159.1-e1159.30.

    C.I. Bucur (Cristina-Iulia), T. Kuhn (Tobias), D. Ceolin (Davide) and J.R. van Ossenbruggen (Jacco)

    February 2023
    open access
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    Towards a unified language for card game design In Proceedings

    R.A. van Rozen (Riemer), A. Bouwer (Anders) and K. Millenaar (Karel)

    April 2023
    open access
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    ScriptButler serves an empirical study of PuzzleScript : Analyzing the expressive power of a game DSL through source code analysis In Proceedings

    C. Julia (Clement) and R.A. van Rozen (Riemer)

    April 2023
    open access
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    Identifying populations at ultra-high risk of suicide using a novel machine learning method Article

    Comprehensive Psychiatry

    G.A. Berkelmans (Guus), L. Schweren (Lizanne), S. Bhulai (Sandjai), R.D. van der Mei (Rob) and R. Gilissen (Renske)

    May 2023
    open access
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    Comparison of stability regions for a line distribution network with stochastic load demands Article

    Queueing Systems

    M.H.M. Christianen, J. Cruise (James), A.J.E.M. Janssen, V. Shneer (Seva), M. Vlasiou (Maria) and A.P. Zwart (Bert)

    March 2023
    open access
  • Chapter 4: Math in the City: Designing a Math Trail for High School Students Book Chapter

    F.G. Bossema (Francien), C. Zwetsloot (Charlotte) and I. Smeets (Ionica)

    January 2023
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    9 × 4 = 6 × 6: Understanding the quantum solution to Euler's problem of 36 officers In Proceedings

    K. Zyczkowski, W. Bruzda (Wojciech), G. Rajchel-Mieldzioć (Grzegorz), A. Burchardt (Adam), S.A. Rather (Suhail Ahmad) and A. Lakshminarayan (Arul)

    January 2023
    open access
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    Palidis: Fast discovery of novel insertion sequences Article

    Microbial genomics, 9(3)

    V.R. Carr (Victoria), S. Pissis (Solon), P. Mullany (Peter), S. Shoaie (Saeed), D. Gomez-Cabrero (David) and D.L. Moyes (David)

    March 2023
    open access
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    Improving the efficiency of renewable energy assets by optimizing the matching of supply and demand using a smart battery scheduling algorithm Article

    Energies, 16(5)

    P. de Bekker (Philippe), S.A. Cremers (Sho), S. Norbu (Sonam), D. Flynn (David) and V. Robu (Valentin)

    March 2023
    open access
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    A computational model for assessing experts’ trustworthiness Article

    Journal of Experimental & Theoretical Artificial Intelligence

    G. Primiero (Giuseppe), D. Ceolin (Davide) and F. Doneda (Francesca)

    March 2023
    open access
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    Automatic landmark correspondence detection in medical images with an application to deformable image registration Article

    Journal of Medical Imaging, 10(1), 014007.1-014007.27.

    M. Grewal (Monika), J. Wiersma (Jan), H. Westerveld (Henrike), P.A.N. Bosman (Peter) and T. Alderliesten (Tanja)

    February 2023
    open access
  • Real-time tilt undersampling optimization during electron tomography of beam sensitive samples using golden ratio scanning and RECAST3D Article

    Nanoscale

    T.M. Craig (Timothy), A.A. Kadu (Ajinkya), K.J. Batenburg (Joost) and S. Bals (Sara)

    February 2023
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    Twisted cohomology and likelihood ideals Tech Report

    S. Matsubara-Heo (Saiei-Jaeyeong) and S.J.L. Telen (Simon Jo L)

    January 2023
    open access
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    Likelihood degenerations Article

    Advances in Mathematics

    D. Agostini (Daniele), T. Brysiewicz (Taylor), C. Fevola (Claudia), L. Kühne (Lukas), B. Sturmfels, S.J.L. Telen (Simon Jo L) and T. Lam (Thomas)

    February 2023
    open access
  • CWI’er Van Dijk geëerd om encryptie-onderzoek - Computable - 20-02-2023 Magazine Article

    February 2023
    open access
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    The Thue–Morse sequence in Base 3/2 Article

    Journal of Integer Sequences, 26(2)

    F.M. Dekking (Michel)

    February 2023
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    Structural risk minimization for quantum linear classifiers Article

    Quantum

    C. Gyurik (Casper), D. van Vreumingen (Dyon) and V. Dunjko (Vedran)

    January 2023
    open access
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    On the complexity of scheduling unrelated parallel machines with limited preemptions Article

    Operations Research Letters, 51(2), 187-189.

    J.K. Lenstra (Jan Karel) and N. Vakhania (Nodari)

    March 2023
    open access
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    Pushdown automata and context-free grammars in bisimulation semantics Article

    Logical Methods in Computer Science, 19(1), 15:1-15:32.

    J.C.M. Baeten (Jos), C. Carissimo (Cesare) and S.P. Luttik (Bas)

    March 2023
    open access
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    Belasting en korting in de trant van Rawls Report

    J.M. Anthonisse

    February 2023
    open access
  • Predicting the prevalence of complex genetic diseases from individual genotype profiles using capsule networks Article

    Nature Machine Intelligence, 114-125.

    X. Luo (Vincent), X. Kang (Xiongbin) and A. Schönhuth (Alexander)

    February 2023
    open access
  • Going green: Optimizing GPUs for energy efficiency through model-steered auto-tuning In Proceedings

    R.A. Schoonhoven (Richard), A.J.P. Veenboer (Bram), B.J.C. van Werkhoven (Ben) and K.J. Batenburg (Joost)

    January 2023
  • A computational study on the energy efficiency of species production by single-pulse streamers in air Article

    Plasma Sources Science and Technology, 32(2)

    B. Guo (Baohong) and H.J. Teunissen (Jannis)

    February 2023
  • Jaccard Median for ego-network segmentation In Proceedings

    H. Zhong (Haodi), G. Loukides (Grigorios), A. Conte (Alessio) and S. Pissis (Solon)

    February 2023
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    Lattice cryptography, from cryptanalysis to new foundations Dissertation

    Cryptology

    W.P.J. van Woerden (Wessel)

    February 2023
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    The Berkelmans-Pries Feature Importance Method: a generic measure of informativeness of features Tech Report

    J. Pries (Joris), G.A. Berkelmans (Guus), S. Bhulai (Sandjai) and R.D. van der Mei (Rob)

    January 2023
    open access
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    Lifting to parity decision trees via Stifling In Proceedings

    A. Chattopadhyay (Arkadev), N.S. Mande (Nikhil), S. Sanyal (Swagato) and S. Sherif (Suhail)

    February 2023
    open access
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    Geometric multigrid method for solving Poisson's equation on octree grids with irregular boundaries Article

    Computer Physics Communications

    H.J. Teunissen (Jannis) and F. Schiavello (Francesca)

    January 2023
    open access
  • Digital humanism: The time is now Article

    Computer, 56(1), 138-142.

    H. Werthner (Hannes), A. Stanger (Allison), V. Schiaffonati (Viola), P. Knees (Peter), L. Hardman (Lynda) and C. Ghezzi (Carlo)

    January 2023
  • Bidirectional String Anchors for Improved Text Indexing and Top-Ƙ Similarity Search Article

    IEEE Transactions on Knowledge and Data Engineering

    G. Loukides (Grigorios), S. Pissis (Solon) and M.J.M. Sweering (Michelle)

    January 2023
  • CT-based data generation for foreign object detection on a single X-ray projection Article

    Nature Scientific Reports, 13(1)

    V. Andriiashen (Vladyslav), R. van Liere (Robert), T. van Leeuwen (Tristan) and K.J. Batenburg (Joost)

    February 2023
    open access
  • Towards artificial intelligence-based automated treatment planning in clinical practice: A prospective study of the first clinical experiences in high-dose-rate prostate brachytherapy Article

    Brachytherapy

    D.L.J. Barten (Danique), B.R. Pieters (Bradley), P.A. Bouter (Anton), M.C. van der Meer (Marjolein), S.C. Maree (Stef), K.A. Hinnen (Karel), H. Westerveld (Henrike), P.A.N. Bosman (Peter), T. Alderliesten (Tanja), N. van Wieringen (Niek), et al. A. Bel (Arjan)

    January 2023
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    On the deep active-subspace method Article

    SIAM/ASA Jounal on Uncertainty Quantification, 11(1), 62-90.

    W.N. Edeling (Wouter)

    February 2023
    open access
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    On distinguishing between canonical tRNA genes and tRNA gene fragments in prokaryotes Article

    RNA Biology, 20(1), 48-58.

    P.T.S. van der Gulik (Peter), M. Egas (Martijn), K. Kraaijeveld (Ken), N. Dombrowski (Nina), A.T. Groot (Astrid), A. Spang (Anja), W.D. Hoff (Wouter) and J. Gallie (Jenna)

    February 2023
    open access
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    Quantum multivariate estimation and span program algorithms Dissertation

    Algorithms and Complexity

    A.J. Cornelissen (Arjan)

    February 2023
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    Optimal mixing evolutionary algorithms for large-scale real-valued optimization Dissertation

    Evolutionary Intelligence

    P.A. Bouter (Anton)

    February 2023
  • PLCrypto: A symmetric cryptographic library for programmable logic controllers Software|Data

    Z. Yang (Zheng), Z. Bao (Zhiting), C. Jin (Chenglu), Z. Liu (Zhe) and J. Zhou (Jianying)

    February 2023
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    Air cargo truck scheduling at a major European airline In Proceedings

    B.T. Markhorst (Berend), R.D. van der Mei (Rob) and E.R. Dugundji (Elenna)

    January 2023
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    Unlucky numbers: fighting murder convictions that rest on shoddy stats - Science - 19-01-2023 Magazine Article

    January 2023
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    Computable - Computable kerstpuzzel 2022 wederom een genoegen - 20-01-2023 Magazine Article

    January 2023
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    Quantum fine-grained complexity Dissertation

    Algorithms and Complexity

    S. Patro (Subhasree)

    February 2023
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    The LDBC social network benchmark: Business intelligence workload In Proceedings

    G. Szárnyas (Gábor), J. Waudby (Jack), B.A. Steer (Benjamin), D. Szakállas (David), A. Birler (Altan), M. Wu (Mingxi), Y. Zhang (Yuchen) and P.A. Boncz (Peter)

    January 2023
    open access
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    Gratis software voor dataverwerking - De Ingenieur - 11-01-2023 Magazine Article

    January 2023
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    Hannes Mühleisen benoemd tot bijzonder hoogleraar data engineering - Emerce - 10-01-2023 Magazine Article

    January 2023
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