Publications from 2022

Sensitivity kernels for receiver function misfits in a full waveform inversion workflow Article

J.H.E. de Jong, H. Paulssen, T. van Leeuwen (Tristan) and J. Trampert

Environmentally induced DNA methylation is inherited across generations in an aquatic keystone species Article

N. Feiner (Nathalie), R. Radersma (Reinder), L. Vasquez (Louella), M. Ringnér (Markus), B. Nystedt (Björn), A. Raine (Amanda), E.W. Tobi (Elmar), B.T. Heijmans (Bastiaan) and T. Uller (Tobias)

Chimney fire prediction based on environmental variables In Proceedings

C. Lu (Changqing), M.N.M. van Lieshout (Marie-Colette), M. de Graaf (Maurits) and P. Visscher (Paul)

Anomaly detection in urban drainage with stereovision Article

D.W.J. Meijer (Dirk), R. Luimes (Rianne), A.J. Knobbe (Arno) and T. Bäck (Thomas)

A framework for efficient dynamic routing under stochastically varying conditions Article

N. Levering (Nikki), M.A.A. Boon (Marko), M.R.H. Mandjes (Michel) and R. Núñez Queija (Rudesindo)

Exploring emotion responses toward pedestrian crossing actions for designing in-vehicle empathic interfaces In Proceedings

S. Ghosh (Surjya), G. Pons (Gerard), S. Rao (Shruti), A. El Ali (Abdallah) and P.S. César Garcia (Pablo Santiago)

Persistence of heavy-tailed sample averages: principle of infinitely many big jumps Article

A. Bhattacharya (Ayan), Z. Palmowski (Zbigniew) and A.P. Zwart (Bert)

Towards socialVR: evaluating a novel technology for watching videos together Article

M.A. Montagud Climent (Mario), J. Li (Jie), G. Cernigliaro (Gianluca), A. El Ali (Abdallah), S. Fernández (Sergio) and P.S. César Garcia (Pablo Santiago)

Internal shortest absent word queries in constant time and linear space Article

G. Badkobeh (Golnaz), P. Charalampopoulos (Panagiotis), D. Kosolobov (Dmitry) and S. Pissis (Solon)

Geometric aspects of linear programming : shadow paths, central paths, and a cutting plane method Dissertation

S. Huiberts (Sophie)

Bounding the separable rank via polynomial optimization Article

S.J. Gribling (Sander), M. Laurent (Monique) and J.A.J. Steenkamp (Andries)

Finite convergence of sum-of-squares hierarchies for the stability number of a graph Article

M. Laurent (Monique) and L.F. Vargas (Luis)

Plusmine: Dynamic Active Learning with Semi-Supervised Learning for automatic classification In Proceedings

J.G. Klein (Jan), S. Bhulai (Sandjai), M. Hoogendoorn (Mark) and R.D. van der Mei (Rob)

A predicate transformer for choreographies: Computing preconditions in choreographic programming In Proceedings

S.-S.T.Q. Jongmans (Sung) and P. van den Bos (Petra)

Peer-to-peer, community self-consumption, and transactive energy: A systematic literature review of local energy market models Article

T. Capper (Timothy), A. Gorbatcheva (Anna), M.A. Mustafa (Mustafa), M. Bahloul (Mohamed), J.M. Schwidtal (Jan Marc), R. Chitchyan (Ruzanna), M. Andoni (Merlinda), V. Robu (Valentin), M. Montakhabi (Mehdi), I.J. Scott (Ian), et al. C. Francis (Christina), T. Mbavarira (Tanaka), J.M. Espana (Juan Manuel) and L. Kiesling (Lynne)

Few-shot learning for fine-grained emotion recognition using physiological signals Article

T. Zhang (Tianyi), A. El Ali (Abdallah), A. Hanjalic (Alan) and P.S. César Garcia (Pablo Santiago)

Arousal state affects perceptual decision-making by modulating hierarchical sensory processing in a large-scale visual system model Article

L.K.A. Sörensen (Lynn), S.M. Bohte (Sander), H.A. Slagter (Heleen) and H.S. Scholte (Steven)

usethesource/rascal-eclipse: 0.23.0 Software

J.J. Vinju (Jurgen), D. Landman (Davy), A.W. Lankamp (Arnold), P. Klint (Paul), M.J. Steindorfer (Michael), E. Balland (Emilie), J.D. Kroon (Joppe), T. van der Storm (Tijs), J. Stoel (Jouke), M.A. Hills (Mark), et al. A.H.S. Bagge (Anya), A. Shahi (Ashim), R.T.A. Aarssen (Rodin), A. Izmaylova (Anastasia), M. Bierlee (Mike), J.J.W. Timmer (Jasper), M. Verano Merino (Mauricio), L.M. Ochoa (Lina), N. Lodewijks (Nick), R. Steins (Ruben) and W. Venema (Wietse)

usethesource/rascal-language-servers: Software

J.J. Vinju (Jurgen), D. Landman (Davy) and R.T.A. Aarssen (Rodin)

wedeling/deep_active_subspace_data: Review of DAS article Software|Data

W.N. Edeling (Wouter)

Efficient Bayesian calibration of aerodynamic wind turbine models using surrogate modeling Article

B. Sanderse (Benjamin), V.V. Dighe (Vinit), K. Boorsma (Koen) and J.G. Schepers (Gerard)

Quantum boomerang attacks and some applications In Proceedings

P. Frixons (Paul), M. Naya-Plasencia (María) and A.C. Schrottenloher (André)

Fast phylogeny of SARS-CoV-2 by compression Article

R.L. Cilibrasi (Rudi) and P.M.B. Vitányi (Paul)

Autonomous Bidding Coordinated Acceptance in one-to-many negotiations In Proceedings

T. Koca (Thimjo), T. Baarslag (Tim) and C.M. Jonker (Catholijn)

Improved quantum algorithms for the k-XOR problem In Proceedings

A.C. Schrottenloher (André)

Liever gemiddeld goed dan eenmalig uitzonderlijk Article

J.A. ter Schure (Judith)

Large-scale semi-automated migration of legacy C/C++ test code Article

M.T.W. Schuts (Mathijs), R.T.A. Aarssen (Rodin), P.M. Tielemans (Paul) and J.J. Vinju (Jurgen)

Why statisticians prefer scoring good on average over exceptional only once Blogpost

J.A. ter Schure (Judith)

New FPT algorithms for finding the temporal hybridization number for sets of phylogenetic trees Article

S.J. Borst (Sander), L.J.J. van Iersel (Leo), M.E.L. Jones (Mark) and S.M. Kelk (Steven)

A data-driven approach to deriving closed-form approximations for queueing problems using genetic algorithms Article

R.D. van der Mei (Rob) and S. Bhulai (Sandjai)

One-way communication complexity and non-adaptive decision trees In Proceedings

N.S. Mande (Nikhil), S. Sanyal (Swagato) and S. Sherif (Suhail)

3D particle simulations of positive air-methane streamers for combustion Article

D.D. Bouwman (Dennis), H.J. Teunissen (Jannis) and U. Ebert (Ute)

Matchgate benchmarking: Scalable benchmarking of a continuous family of many-qubit gates Article

J. Helsen (Jonas), S. Nezami (Sepehr), M. Reagor (Matthew) and M. Walter (Michael)

A duality based 2-approximation algorithm for maximum agreement forest Article

N.K. Olver (Neil), F. Schalekamp (Frans), S.L. van der Ster (Suzanne), L. Stougie (Leen) and A. van Zuylen (Anke)

A first-order statistical exploration of the mathematical limits of Micromagnetic Tomography Article

F. Out (Frenk), D. Cortés-Ortuño (David), K. Fabian (Karl), T. van Leeuwen (Tristan) and L.V. de Groot (Lennart)

Adaptive sparse-grid tutorial Lecture

W.N. Edeling (Wouter)

ALL-IN meta-analysis Dissertation

J.A. ter Schure (Judith)

The enriched median routing problem and its usefulness in practice Article

D. Huizing (Dylan), R.D. van der Mei (Rob), G. Schäfer (Guido) and S. Bhulai (Sandjai)

Trajectory with Overlapping Projections x-ray Computed Tomography (TOP-CT) dataset of 23 mandarins moving over a circular trajectory Dataset

D.E. Schut (Dirk)

Detecting changes in help seeker conversations on a suicide prevention helpline during the COVID− 19 pandemic: in-depth analysis using encoder representations from transformers Article

S. Salmi (Salim), S. Mérelle (Saskia), R. Gilissen (Renske), R.D. van der Mei (Rob) and S. Bhulai (Sandjai)

Hide and mine in strings: Hardness, algorithms, and experiments Article

G. Bernardini (Giulia), Conte (Alessio), Gourdel (Garance), R. Grossi (Roberto), G. Loukides (Grigorios), N. Pisanti (Nadia), S. Pissis (Solon), Punzi (Giulia), L. Stougie (Leen) and M.J.M. Sweering (Michelle)

Conjectures on symmetric queues in heavy traffic Article

A.P. Zwart (Bert)

Anytime-valid confidence intervals for contingency tables and beyond Tech Report

R.J. Turner (Rosanne) and P.D. Grünwald (Peter)

Seasonal variation in the response to a toxin-producing cyanobacteria in Daphnia Article

A. Hegg (Alexander), R. Radersma (Reinder) and T. Uller (Tobias)

Weakly-supervised learning for fine-grained emotion recognition using physiological signals Article

T. Zhang (Tianyi), A. El Ali (Abdallah), C. Wang (Chen), A. Hanjalic (Alan) and P.S. César Garcia (Pablo Santiago)

Leveraging spiking deep neural networks to understand the neural mechanisms underlying selective attention Article

L.K.A. Sörensen (Lynn), D. Zambrano (Davide), H.A. Slagter (Heleen), S.M. Bohte (Sander) and H.S. Scholte (Steven)

A Bayesian perspective on Biogen's aducanumab trial Article

A.G.M. Temp (Anna), A. Ly (Alexander), J. van Doorn (Johnny), E.-J. Wagenmakers (Eric-Jan), Y. Tang (Yi), M.W. Lutz (Michael) and S. Teipel (Stefan)

Exploring neuroscience literature and understanding relations between brain-related topics - Using Augmented Reality In Proceedings

G. Tanhaei (Ghazaleh)

Steps towards openness and fairness in scientific publishing Article

J. Briët (Jop), D. Holmes (David) and R.J. Kang (Ross)

On capital allocation for a risk measure derived from ruin theory Article

G.A. Delsing, M.R.H. Mandjes (Michel), P.J.C. Spreij (Peter) and E.M.M. Winands

The Seven-League scheme: Deep learning for large time step Monte Carlo simulations of stochastic differential equations Article

S. Liu (Shuaiqiang), L.A. Grzelak (Lech Aleksander) and C.W. Oosterlee (Kees)

Accurate training of the Cox proportional hazards model on vertically-partitioned data while preserving privacy Article

B. Kamphorst (Bart), T. Rooijakkers (Thomas), P.J.M. Veugen (Thijs), M. Cellamare (Matteo) and D. Knoors (Daan)

A distribution function from population genetics statistics using Stirling numbers of the first kind: Asymptotics, inversion and numerical evaluation Article

S.L. Chen (Swaine) and N.M. Temme (Nico)

Imaginary Quadratic Class Groups and a Survey of Time-Lock Cryptographic Applications Tech Report

A.N. van Baarsen (Aron)

A review: Challenges and opportunities for artificial intelligence and robotics in the offshore wind sector Article

D. Mitchell (Daniel), J. Blanche (Jamie), S. Harper (Samuel), T. Lim (Theodore), R. Gupta (Ranjeetkumar), O. Zaki (Osama), W. Tang (Wenshuo), V. Robu (Valentin), S. Watson (Simon) and D. Flynn (David)

Optimal call center forecasting and staffing Article

S. Ding (Sihan) and G.M. Koole (Ger)

J. Goseling and M.N.M. van Lieshout’s contribution to the Discussion of ‘Gaussian Differential Privacy’ by Dong et al. Peer Review

J. Goseling (Jasper) and M.N.M. van Lieshout (Marie-Colette)

Flexible plenoptic X-ray microscopy Article

E. Longo (Elena), D. Alj (Domenico), K.J. Batenburg (Joost), O. de la Rochefoucauld (Ombeline), C. Herzog (Charlotte), I. Greving (Imke), Y. Li (Ying), M. Lyubomirskiy (Mikhail), K.V. Falch (Ken Vidar), P. Estrela (Patricia), et al. S. Flenner (Silja), N.R. Viganò (Nicola), M. Fajardo (Marta) and P. Zeitoun (Philippe)

Computational investigations of streamers : from input cross sections to evolution of plasma species Dissertation

A. Martinez (Andy)

A generalized non-linear flow law based on Modified Zerilli–Armstrong model and its implementation into Abaqus/Explicit FEM code Tech Report

P. Tize Mha (Pierre), A. Tongne (Amèvi) and O. Pantalé (Olivier)

Efficient computation of sequence mappability Article

P. Charalampopoulos (Panagiotis), C.S. Iliopoulos (Costas), T. Kociumaka (Tomasz), S. Pissis (Solon), J. Radoszewski (Jakub) and J. Straszyński (Juliusz)

Limits of quantum speed-ups for computational geometry and other problems: Fine-grained complexity via quantum walks In Proceedings

H.M. Buhrman (Harry), B. S. Loff Barreto (Bruno Serra), S. Patro (Subhasree) and F. Speelman (Florian)

Clustering sequence graphs Article

H. Zhong (Haodi), G. Loukides (Grigorios) and S. Pissis (Solon)

Deep learning for tomographic reconstruction with limited data Dissertation

A.A. Hendriksen (Allard)

A machine learning approach to itinerary-level booking prediction in competitive airline markets Article

D. Hopman (Daniel), G.M. Koole (Ger) and R.D. van der Mei (Rob)

Testing biodiversity using inhomogeneous summary statistics and global envelope tests Article

M. de Jongh (Maike) and M.N.M. van Lieshout (Marie-Colette)

Short-term forecasting of off-street parking occupancy Article

E.S. Fokker (Elisabeth), T. Koch (Thomas), M. van Leeuwen (Marco) and E.R. Dugundji (Elenna)

A reduced reference metric for visual quality evaluation of point cloud contents Software|Data

I. Viola (Irene) and P.S. César Garcia (Pablo Santiago)

A color-based objective quality metric for point cloud contents Software|Data

I. Viola (Irene), S. Subramanyam (Shishir) and P.S. César Garcia (Pablo Santiago)

User Centered Adaptive Streaming of Dynamic Point Clouds with Low Complexity Tiling Dataset

S. Subramanyam (Shishir), I. Viola (Irene), A. Hanjalic (Alan) and P.S. César Garcia (Pablo Santiago)

Lightweight secure integer comparison Article

P.J.M. Veugen (Thijs)

Bringing Differential Private SGD to Practice: On the Independence of Gaussian Noise and the Number of Training Rounds Article

M.E. van Dijk (Marten), N. V. Nguyen (Nhuong), T. N. Nguyen (Toan), L. M. Nguyen (Lam) and P.H. Nguyen (Phuong Ha)

Secure Remote Attestation with Strong Key Insulation Guarantees Article

D. Gurevin (Deniz), C. Jin (Chenglu), P.H. Nguyen (Phuong Ha), O. Khan (Omer) and M.E. van Dijk (Marten)

Programmable access-controlled and generic erasable PUF design and its applications Article

C. Jin (Chenglu), W. Burleson (Wayne), M.E. van Dijk (Marten) and U. Rührmair (Ulrich)

safestats: Safe Anytime-Valid Inference Software|Data

R.J. Turner (Rosanne), A. Ly (Alexander), M.F. Pérez (Muriel), J.A. ter Schure (Judith) and P.D. Grünwald (Peter)

Invisible XML Specification (Draft) Standard

Budget-feasible mechanism design for non-monotone submodular objectives: Offline and online Article

G. Amanatidis (Georgios), P.S. Kleer (Pieter) and G. Schäfer (Guido)

Radiation-hydrodynamics with MPI-AMRVAC: Flux-limited diffusion Article

N. Moens, J.O. Sundqvist, I. El Mellah, L. Poniatowski, H.J. Teunissen (Jannis) and R. Keppens (Rony)

On the impact of linkage learning, gene-pool optimal mixing, and non-redundant encoding on permutation optimization Article

A. Guijt (Arthur), N.H. Luong (Hoang), P.A.N. Bosman (Peter) and M.M. de Weerdt (Mathijs)

An algorithmic reduction theory for binary codes: LLL and more Article

T. Debris-Alazard (Thomas), L. Ducas (Léo) and W.P.J. van Woerden (Wessel)

A collection of 131 CT datasets of pieces of modeling clay containing stones - Part 1 of 5 Software|Data

M.T. Zeegers (Mathé)

A collection of X-ray projections of 131 pieces of modeling clay containing stones for machine learning-driven object detection Dataset

M.T. Zeegers (Mathé)

Smart contracts in energy systems: A systematic review of fundamental approaches and implementations Article

D. Kirli (Desen), B. Couraud (Benoit), V. Robu (Valentin), M. Salgado-Bravo (Marcelo), S. Norbu (Sonam), M. Andoni (Merlinda), I. Antonopoulos (Ioannis), M. Negrete-Pincetic (Matias), D. Flynn (David) and A. Kiprakis (Aristides)

Strainline: Full-length de novo viral haplotype reconstruction from noisy long reads Article

X. Luo (Vincent), X. Kang (Xiongbin) and A. Schönhuth (Alexander)

New year's speech of Ton de Kok, January 20, 2022 Miscellaneous

A.G. de Kok (Ton)

A regularised total least squares approach for 1D inverse scattering Article

A. Tataris (Andreas) and T. van Leeuwen (Tristan)

High resolution 3D ultrasonic breast imaging by time-domain full waveform inversion Article

F. Lucka (Felix), M. Pérez-Liva (Mailyn), B.E. Treeby (Bradley) and B.T. Cox (Ben)

Foam-like phantoms for comparing tomography algorithms Article

D.M. Pelt (Daniël), A.A. Hendriksen (Allard) and K.J. Batenburg (Joost)

Prognostics for electromagnetic relays using deep learning Article

L. Kirschbaum (Lucas), V. Robu (Valentin), J. Swingler (Jonathan) and D. Flynn (David)

Efficient sampling and solver enhancement for uncertainty quantification Dissertation

Y. van Halder (Yous)

Quasirandomness in quantum information theory Dissertation

F.S. Labib (Farrokh)

Sum-of-squares hierarchies for binary polynomial optimization Article

L.F.H. Slot (Lucas) and M. Laurent (Monique)

Symmetry and quantum query-to-communication simulation In Proceedings

S. Chakraborty (Sourav), A. Chattopadhyay (Arkadev), P. Høyer (Peter), N.S. Mande (Nikhil), M. Paraashar (Manaswi) and R.M. de Wolf (Ronald)

A comparison of particle and fluid models for positive streamer discharges in air Article

Z. Wang (Zhen), A.B. Sun (Anbang) and H.J. Teunissen (Jannis)

Bargaining Chips: Coordinating one-to-many concurrent composite negotiations In Proceedings

T. Baarslag (Tim), T.L.J. Elfrink (Tijmen), F. Nassiri Mofakham (Faria), T. Koca (Thimjo), M. Kaisers (Michael) and R. Aydoğan (Reyhan)

BBC News: Like a good deal? Maybe a Hagglebot can help Magazine Article

An operational bidding framework for aggregated electric vehicles on the electricity spot market Article

L.R. Visser, M.E. Kootte, A.C. Ferreira, O. Sicurani, E.J.E.M. Pauwels (Eric), C. Vuik, W.G.J.H.M. van Sark and T.A. AlSkaif

Optimally weighted loss functions for solving PDEs with Neural Networks Article

R. van der Meer (Remco), C.W. Oosterlee (Kees) and A.I. Borovykh (Anastasia)

Complete asymptotic expansions for the relativistic Fermi-Dirac integral Article

A. Gil (Amparo), J. Segura (Javier) and N.M. Temme (Nico)