This repository contains an implementation of the algorithms for computing the temporal hybridization number from the master thesis 'New FPT algorithms for finding the temporal hybridization number for sets of phylogenetic trees'. Because the code has been optimized for speed, some functions are more complex than strictly necessary.

The code can be compiled on linux with:

cmake .  
make cherrypick_cpp

For more information on running the program run

./cherrypicking_cpp -h